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Wouter Rappel

Verified

University of California, San Diego · Astronomy and Astrophysics

Active 1988–2024

h-index66
Citations16.1k
Papers31757 last 5y
Funding$29.5M2 active
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Research topics

  • Computer Science
  • Biology
  • Neuroscience
  • Biological system
  • Mathematics
  • Physics
  • Psychology
  • Genetics
  • Telecommunications
  • Optoelectronics
  • Mathematical analysis

Selected publications

  • Cellular memory in eukaryotic chemotaxis depends on the background chemoattractant concentration

    Physical review. E · 2021 · 27 citations

    Senior authorCorresponding
    • Computer Science
    • Biology
    • Physics

    Cells of the social amoeba Dictyostelium discoideum migrate to a source of periodic traveling waves of chemoattractant as part of a self-organized aggregation process. An important part of this process is cellular memory, which enables cells to respond to the front of the wave and ignore the downward gradient in the back of the wave. During this aggregation, the background concentration of the chemoattractant gradually rises. In our microfluidic experiments, we exogenously applied periodic waves of chemoattractant with various background levels. We find that increasing background does not make detection of the wave more difficult, as would be naively expected. Instead, we see that the chemotactic efficiency significantly increases for intermediate values of the background concentration but decreases to almost zero for large values in a switch-like manner. These results are consistent with a computational model that contains a bistable memory module, along with a nonadaptive component. Within this model, an intermediate background level helps preserve directed migration by keeping the memory activated, but when the background level is higher, the directional stimulus from the wave is no longer sufficient to activate the bistable memory, suppressing directed migration. These results suggest that raising levels of chemoattractant background may facilitate the self-organized aggregation in Dictyostelium colonies.

Recent grants

Frequent coauthors

  • Herbert Levine

    Northeastern University

    158 shared
  • Sanjiv M. Narayan

    Stanford University

    138 shared
  • David E. Krummen

    University of California, San Diego

    65 shared
  • Albert J. Rogers

    Stanford University

    60 shared
  • Tina Baykaner

    Stanford University

    46 shared
  • Paul J. Wang

    Stanford University

    44 shared
  • Neal K. Bhatia

    Emory University Hospital

    39 shared
  • Eberhard Bodenschatz

    29 shared
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