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Nova · Professor Researcher · re-ranking top 20…
Yuchen Li

Yuchen Li

Verified

University of California, Santa Barbara · Philosophy

Active 1991–2024

h-index31
Citations3.5k
Papers18253 last 5y
Funding
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Research topics

  • Biology
  • Crystallography
  • Chemistry
  • Biophysics
  • Cell biology
  • Stereochemistry
  • Materials science
  • Ecology
  • Physics
  • Polymer chemistry
  • Geometry

Selected publications

  • Complexes of tubulin oligomers and tau form a viscoelastic intervening network cross-bridging microtubules into bundles

    Nature Communications · 2024 · 12 citations

    • Biophysics
    • Crystallography
    • Chemistry

    ), and a tubulin ring phase. SAXS with TEM of plastic-embedded samples provides evidence of a viscoelastic intervening network (IN) of complexes of tubulin oligomers and tau stabilizing MT bundles. In this model, αβ-tubulin oligomers in the IN are crosslinked by tau's MT binding repeats, which also link αβ-tubulin oligomers to αβ-tubulin within the MT lattice. The model challenges whether the cross-bridging of MTs is attributed entirely to MAPs. Tubulin-tau complexes in the IN or bound to isolated MTs are potential sites for enzymatic modification of tau, promoting nucleation and growth of tau fibrils in tauopathies.

  • Tubulin Double Helix: Lateral and Longitudinal Curvature Changes of Tubulin Protofilament

    Small · 2020 · 5 citations

    • Biophysics
    • Cell biology
    • Materials science

    By virtue of their native structures, tubulin dimers are protein building blocks that are naturally preprogrammed to assemble into microtubules (MTs), which are cytoskeletal polymers. Here, polycation-directed (i.e., electrostatically tunable) assembly of tubulins is demonstrated by conformational changes to the tubulin protofilament in longitudinal and lateral directions, creating tubulin double helices and various tubular architectures. Synchrotron small-angle X-ray scattering and transmission electron microscopy reveal a remarkable range of nanoscale assembly structures: single- and double-layered double-helix tubulin tubules. The phase transitions from MTs to the new assemblies are dependent on the size and concentration of polycations. Two characteristic scales that determine the number of observed phases are the size of polycation compared to the size of tubulin (≈4 nm) and to MT diameter (≈25 nm). This work suggests the feasibility of using polycations that have scissor- and glue-like properties to achieve "programmable breakdown" of protein nanotubes, tearing MTs into double-stranded tubulins and building up previously undiscovered nanostructures. Importantly, a new role of tubulins is defined as 2D shape-controllable building blocks for supramolecular architectures. These findings provide insight into the design of protein-based functional materials, for example, as metallization templates for nanoscale electronic devices, molecular screws, and drug delivery vehicles.

Frequent coauthors

  • Cyrus R. Safinya

    University of California, Santa Barbara

    117 shared
  • Myung Chul Choi

    Korea Institute of Brain Science

    48 shared
  • Leslie Wilson

    32 shared
  • Phillip Kohl

    University of California, Santa Barbara

    29 shared
  • Jacob N. Israelachvili

    29 shared
  • Stuart C. Feinstein

    University of California, Santa Barbara

    29 shared
  • Herbert P. Miller

    University of California, Santa Barbara

    28 shared
  • Chaeyeon Song

    25 shared
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