
Yuchen Li
VerifiedUniversity of California, Santa Barbara · Philosophy
Active 1991–2024
Research topics
- Biology
- Crystallography
- Chemistry
- Biophysics
- Cell biology
- Stereochemistry
- Materials science
- Ecology
- Physics
- Polymer chemistry
- Geometry
Selected publications
Nature Communications · 2024 · 12 citations
- Biophysics
- Crystallography
- Chemistry
), and a tubulin ring phase. SAXS with TEM of plastic-embedded samples provides evidence of a viscoelastic intervening network (IN) of complexes of tubulin oligomers and tau stabilizing MT bundles. In this model, αβ-tubulin oligomers in the IN are crosslinked by tau's MT binding repeats, which also link αβ-tubulin oligomers to αβ-tubulin within the MT lattice. The model challenges whether the cross-bridging of MTs is attributed entirely to MAPs. Tubulin-tau complexes in the IN or bound to isolated MTs are potential sites for enzymatic modification of tau, promoting nucleation and growth of tau fibrils in tauopathies.
Tubulin Double Helix: Lateral and Longitudinal Curvature Changes of Tubulin Protofilament
Small · 2020 · 5 citations
- Biophysics
- Cell biology
- Materials science
By virtue of their native structures, tubulin dimers are protein building blocks that are naturally preprogrammed to assemble into microtubules (MTs), which are cytoskeletal polymers. Here, polycation-directed (i.e., electrostatically tunable) assembly of tubulins is demonstrated by conformational changes to the tubulin protofilament in longitudinal and lateral directions, creating tubulin double helices and various tubular architectures. Synchrotron small-angle X-ray scattering and transmission electron microscopy reveal a remarkable range of nanoscale assembly structures: single- and double-layered double-helix tubulin tubules. The phase transitions from MTs to the new assemblies are dependent on the size and concentration of polycations. Two characteristic scales that determine the number of observed phases are the size of polycation compared to the size of tubulin (≈4 nm) and to MT diameter (≈25 nm). This work suggests the feasibility of using polycations that have scissor- and glue-like properties to achieve "programmable breakdown" of protein nanotubes, tearing MTs into double-stranded tubulins and building up previously undiscovered nanostructures. Importantly, a new role of tubulins is defined as 2D shape-controllable building blocks for supramolecular architectures. These findings provide insight into the design of protein-based functional materials, for example, as metallization templates for nanoscale electronic devices, molecular screws, and drug delivery vehicles.
Frequent coauthors
- 117 shared
Cyrus R. Safinya
University of California, Santa Barbara
- 48 shared
Myung Chul Choi
Korea Institute of Brain Science
- 32 shared
Leslie Wilson
- 29 shared
Phillip Kohl
University of California, Santa Barbara
- 29 shared
Jacob N. Israelachvili
- 29 shared
Stuart C. Feinstein
University of California, Santa Barbara
- 28 shared
Herbert P. Miller
University of California, Santa Barbara
- 25 shared
Chaeyeon Song
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